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comment	@# @;


1.12
date	2012.10.25.23.05.56;	author bapt;	state dead;
branches;
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1.11
date	2012.09.20.22.26.26;	author bapt;	state Exp;
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1.10
date	2010.06.13.08.39.55;	author erwin;	state Exp;
branches;
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1.9
date	2007.04.16.11.58.10;	author edwin;	state Exp;
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1.8
date	2006.12.26.12.46.33;	author linimon;	state Exp;
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1.7
date	2006.05.03.23.26.32;	author edwin;	state Exp;
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1.6
date	2006.01.09.03.25.02;	author edwin;	state Exp;
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1.5
date	2004.02.23.03.54.36;	author kris;	state Exp;
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1.4
date	2003.09.24.09.37.06;	author osa;	state Exp;
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1.2
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1.1
date	2001.12.19.03.20.47;	author petef;	state Exp;
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desc
@@


1.12
log
@SVN rev 306411 on 2012-10-25 23:05:56Z by bapt

2012-10-20 chinese/wangttf: No more public distfiles
2012-10-20 chinese/stardict-dict-zh_TW: No more public distfiles
2012-10-20 chinese/stardict-dict-zh_CN: No more public distfiles
2012-10-20 chinese/mingunittf: No more public distfiles
2012-10-20 chinese/dfsongsd: No more public distfiles
2012-10-20 biology/dna-qc: No more public distfiles

Feature safe:	yes
@
text
@# New ports collection makefile for:	dna-qc
# Date created:				25 Novemeber 2001
# Whom:					Tony Maher <tonym@@biolateral.com.au>
#
# $FreeBSD: ports/biology/dna-qc/Makefile,v 1.11 2012/09/20 22:26:26 bapt Exp $
#

PORTNAME=	dna-qc
PORTVERSION=	1993.07.26
CATEGORIES=	biology
MASTER_SITES=	ftp://ftp.tigr.org/pub/software/qc/
DISTNAME=	qc
EXTRACT_SUFX=	.tar.Z

MAINTAINER=	ports@@FreeBSD.org
COMMENT=	A quality control algorithm for DNA sequencing projects

DEPRECATED=	No more public distfiles
EXPIRATION_DATE=	2012-10-20

NO_WRKSUBDIR=	true

EXAMPLES=	README script.compare script.limits \
		bact.all chromosomeIII.all human.all worm.all
PROGRAMS=	counter hybridize normalize random_clip random_line

.include <bsd.port.pre.mk>

.if ${ARCH} == "alpha"
BROKEN=		Does not compile
.endif

post-patch:
	@@${REINPLACE_CMD} -e 's,^CFLAGS,#CFLAGS,' ${WRKSRC}/Makefile
	@@${REINPLACE_CMD} -e 's,malloc.h,stdlib.h,' ${WRKSRC}/normalize.c
	@@${REINPLACE_CMD} -e 's,fname\*,fname,' ${WRKSRC}/random_line.c
	@@${REINPLACE_CMD} -e 's,static void allocate_pool,void allocate_pool,' \
		${WRKSRC}/stringpool.c

do-install:
.for file in ${PROGRAMS}
	${INSTALL_PROGRAM} ${WRKSRC}/${file} ${PREFIX}/bin
	${STRIP_CMD} ${PREFIX}/bin/${file}
.endfor
.if !defined(NOPORTDOCS)
	@@${MKDIR} ${DOCSDIR}
	${INSTALL_DATA} ${WRKSRC}/qc_doc/* ${DOCSDIR}
	${INSTALL_DATA} ${WRKSRC}/surprize_doc/* ${DOCSDIR}
	@@${MKDIR} ${EXAMPLESDIR}
.for file in ${EXAMPLES}
	${INSTALL_DATA} ${WRKSRC}/${file} ${EXAMPLESDIR}
.endfor
.endif

.include <bsd.port.post.mk>
@


1.11
log
@SVN rev 304604 on 2012-09-20 22:26:26Z by bapt

Deprecated a bunch a ports with nor more public distfiles (thanks ehaupt's
distilator
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.10
log
@BROKEN should not be quoted.
No functional change.
@
text
@d18 3
@


1.9
log
@Remove always-true condition due to OSVERSION
@
text
@d27 1
a27 1
BROKEN=		"Does not compile"
@


1.8
log
@Reset tonymaher@@optusnet.com.au due to maintainer-timeouts and no response
to email.

Hat:		portmgr
@
text
@d26 1
a26 1
.if ${ARCH} == "alpha" && ${OSVERSION} >= 502102
@


1.7
log
@Remove USE_REINPLACE from all categories starting with B
@
text
@d15 1
a15 1
MAINTAINER=	tonymaher@@optusnet.com.au
@


1.6
log
@Fix maintainer address

    From: Tony Maher <anthony.maher@@uts.edu.au>
    To: Edwin Groothuis <edwin@@FreeBSD.org>
    Subject: Re: ports/91537: maths/xgobi - download site moved/maintainer addressupdate

    Actually I need  modify all my ports to use OptusNet rather than
    Biolateral.  Is there an easy way to do this or should I submit a
    separate 1-line patch and PR for each port?

    biology/crimap
    biology/dna-qc
    biology/flip
    biology/primer3
    biology/seqio
    biology/wise
    math/xgobi
    net/generic-nqs

Submitted by:	Tony Maher <anthony.maher@@uts.edu.au>
@
text
@a18 1
USE_REINPLACE=	yes
@


1.5
log
@BROKEN on alpha 5.x: does not compile
@
text
@d15 1
a15 1
MAINTAINER=	tonym@@biolateral.com.au
@


1.4
log
@Make portlint(1) happy by changing strip to ${STRIP_CMD}

Submitted by:	Oleg Karachevtsev <ok@@etrust.ru>
PR:		56998
@
text
@d25 6
d53 1
a53 1
.include <bsd.port.mk>
@


1.3
log
@De-pkg-comment.
@
text
@d35 1
a35 1
	strip ${PREFIX}/bin/${file}
@


1.2
log
@PERL -> REINPLACE
And some ports have USE_PERL5=yes now.
@
text
@d16 1
@


1.1
log
@Add dna-qc 1993.07.26, a quality control algorithm for DNA
sequencing projects.

PR:		32998
Submitted by:	Tony Maher <tonym@@biolateral.com.au>
@
text
@d18 1
d25 4
a28 4
	@@${PERL} -pi -e 's,^CFLAGS,#CFLAGS,' ${WRKSRC}/Makefile
	@@${PERL} -pi -e 's,malloc.h,stdlib.h,' ${WRKSRC}/normalize.c
	@@${PERL} -pi -e 's,fname\*,fname,' ${WRKSRC}/random_line.c
	@@${PERL} -pi -e 's,static void allocate_pool,void allocate_pool,' \
@

