head	1.2;
access;
symbols
	RELEASE_8_3_0:1.2
	RELEASE_9_0_0:1.2
	RELEASE_7_4_0:1.1
	RELEASE_8_2_0:1.1
	RELEASE_6_EOL:1.1
	RELEASE_8_1_0:1.1
	RELEASE_7_3_0:1.1
	RELEASE_8_0_0:1.1
	RELEASE_7_2_0:1.1
	RELEASE_7_1_0:1.1
	RELEASE_6_4_0:1.1
	RELEASE_5_EOL:1.1
	RELEASE_7_0_0:1.1
	RELEASE_6_3_0:1.1
	PRE_XORG_7:1.1
	RELEASE_4_EOL:1.1
	RELEASE_6_2_0:1.1
	RELEASE_6_1_0:1.1
	RELEASE_5_5_0:1.1
	RELEASE_6_0_0:1.1
	RELEASE_5_4_0:1.1
	RELEASE_4_11_0:1.1
	RELEASE_5_3_0:1.1
	RELEASE_4_10_0:1.1
	RELEASE_5_2_1:1.1
	RELEASE_5_2_0:1.1
	RELEASE_4_9_0:1.1
	RELEASE_5_1_0:1.1
	RELEASE_4_8_0:1.1
	RELEASE_5_0_0:1.1
	RELEASE_4_7_0:1.1
	RELEASE_4_6_2:1.1
	RELEASE_4_6_1:1.1
	RELEASE_4_6_0:1.1
	RELEASE_5_0_DP1:1.1
	RELEASE_4_5_0:1.1
	RELEASE_4_4_0:1.1
	RELEASE_4_3_0:1.1
	RELEASE_4_2_0:1.1;
locks; strict;
comment	@# @;


1.2
date	2011.08.26.00.24.48;	author wen;	state Exp;
branches;
next	1.1;

1.1
date	2000.10.12.12.31.13;	author jeh;	state Exp;
branches;
next	;


desc
@@


1.2
log
@- Fix MASTER_SITES and WWW: line
- Add LICENSE
- Support CC/CFLAGS properly

PR:		ports/160083
Submitted by:	KATO Tsuguru <tkato432@@yahoo.com>
@
text
@fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML
(part of his PHYLIP package). Users should consult the documentation for
DNAML before using this program.

fastDNAml is an attempt to solve the same problem as DNAML, but to do so
faster and using less memory, so that larger trees and/or more bootstrap
replicates become tractable. Much of fastDNAml is merely a recoding of the
PHYLIP 3.3 DNAML program from PASCAL to C.

WWW: http://www.life.illinois.edu/gary/programs/fastDNAml.html
@


1.1
log
@Initial import of fastDNAml Version 1.2.2

The faster variant of DNAML, makes phylogenetic trees using maximum likelihood

PR:		21931
Submitted by:	Motomichi Matsuzaki <mzaki@@e-mail.ne.jp>
@
text
@d1 8
a8 2
fastDNAml is a program for estimating maximum likelihood phylogenetic trees
from nucleotide sequences. 
d10 1
a10 19
WWW: http://geta.life.uiuc.edu/~gary/programs/fastDNAml.html

fastDNAml is an attempt to solve the same problem as Joseph Felsenstein's
DNAML, but to do so faster and using less memory, so that larger trees and/or
more bootstrap replicates become tractable. Much of fastDNAml is merely a
recoding of the PHYLIP 3.3 DNAML program from PASCAL to C. 

For Felsenstein's phylogenetic analysis softwares, including the latest
versions of DNAML, visit the PHYLIP Home Page:
	http://evolution.genetics.washington.edu/phylip.html

When publishing work that based on results from fastDNAml please cite:

   Felsenstein, J.  1981.  Evolutionary trees from DNA sequences:
   A maximum likelihood approach.  J. Mol. Evol. 17: 368-376.

   Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R.  1994.
   fastDNAml:  A tool for construction of phylogenetic trees of DNA
   sequences using maximum likelihood.  Comput. Appl. Biosci. 10: 41-48.
@

