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comment	@# @;


1.4
date	2009.02.01.08.17.14;	author pgollucci;	state Exp;
branches;
next	1.3;

1.3
date	2001.07.05.08.58.12;	author wjv;	state Exp;
branches;
next	1.2;

1.2
date	99.05.02.21.37.55;	author hoek;	state Exp;
branches;
next	1.1;

1.1
date	98.07.12.23.30.03;	author steve;	state Exp;
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	1.1.1.1;
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1.1.1.1
date	98.07.12.23.30.03;	author steve;	state Exp;
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next	;


desc
@@


1.4
log
@- Update download locations, update WWW

Reported by:    -fetch-original pointyhat run
@
text
@HMMER is an implementation of profile hidden Markov model methods for
sensitive searches of biological sequence databases using multiple sequence
alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical
model called a "hidden Markov model" which can then be used as a query into
a sequence database to find (and/or align) additional homologues of the
sequence family.

WWW: http://hmmer.janelia.org/
@


1.3
log
@- General clean-up of port.
- Install PDF and HTML documentation.
- Take over maintainership.

Approved by:	Silence from previous maintainer; no objections from -ports
@
text
@d10 1
a10 1
WWW: http://hmmer.wustl.edu/
@


1.2
log
@Weasal and Wabbits and BIG FOOT.
@
text
@d1 3
a3 2
HMMER is an implementation of profile HMM methods for sensitive database 
searches using multiple sequence alignments as queries.
d5 4
a8 4
Basically, you give HMMER a multiple sequence alignment as input; it builds 
a statistical model called a "hidden Markov model" which you can then use as 
a query into a sequence database to find (and/or align) additional 
homologues of the sequence family.
@


1.1
log
@Initial revision
@
text
@d9 1
a9 2
Hmmer is developed by Sean Eddy at Washington University School of Medicine.
More information is available at http://hmmer.wustl.edu/
@


1.1.1.1
log
@Initial import of hmmer version 2.0.
Profile hidden Markov models for biological sequence analysis.

PR:		7120
Submitted by:	Matthew Jason Euclid Barnhart <barnhart@@sequencer.wustl.edu>
@
text
@@
