head	1.7;
access;
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	RELEASE_8_3_0:1.4
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	RELEASE_7_4_0:1.3
	RELEASE_8_2_0:1.3
	RELEASE_6_EOL:1.3
	RELEASE_8_1_0:1.3
	RELEASE_7_3_0:1.3
	RELEASE_8_0_0:1.3
	RELEASE_7_2_0:1.3
	RELEASE_7_1_0:1.3
	RELEASE_6_4_0:1.3
	RELEASE_5_EOL:1.2
	RELEASE_7_0_0:1.2
	RELEASE_6_3_0:1.2
	PRE_XORG_7:1.1
	RELEASE_4_EOL:1.1
	RELEASE_6_2_0:1.1
	RELEASE_6_1_0:1.1
	RELEASE_5_5_0:1.1;
locks; strict;
comment	@# @;


1.7
date	2012.12.10.11.29.53;	author svnexp;	state Exp;
branches;
next	1.6;

1.6
date	2012.11.17.05.54.51;	author svnexp;	state Exp;
branches;
next	1.5;

1.5
date	2012.10.01.14.45.16;	author tabthorpe;	state Exp;
branches;
next	1.4;

1.4
date	2011.07.21.05.02.26;	author linimon;	state Exp;
branches;
next	1.3;

1.3
date	2008.06.06.13.08.29;	author edwin;	state Exp;
branches;
next	1.2;

1.2
date	2007.05.19.20.00.23;	author flz;	state Exp;
branches;
next	1.1;

1.1
date	2006.02.13.09.42.13;	author hq;	state Exp;
branches;
next	;


desc
@@


1.7
log
@## SVN ## Exported commit - http://svnweb.freebsd.org/changeset/base/308600
## SVN ## CVS IS DEPRECATED: http://wiki.freebsd.org/CvsIsDeprecated
## SVN ##
## SVN ## ------------------------------------------------------------------------
## SVN ## r308600 | bapt | 2012-12-10 11:25:27 +0000 (Mon, 10 Dec 2012) | 3 lines
## SVN ##
## SVN ## Decommissioning java 1.5 (EOLed since October 2009):
## SVN ## suppress any reference to USE_JAVA=	1.5+ (part1)
## SVN ##
## SVN ## ------------------------------------------------------------------------
## SVN ##
@
text
@# Created by: Fernan Aguero <fernan@@iib.unsam.edu.ar>
# $FreeBSD: head/biology/jalview/Makefile 308600 2012-12-10 11:25:27Z bapt $

PORTNAME=	jalview
PORTVERSION=	2.07
PORTREVISION=	2
CATEGORIES=	biology java
MASTER_SITES=	http://www.jalview.org/source/
DISTNAME=	${PORTNAME}_${PORTVERSION:S/./_/}

MAINTAINER=	ports@@FreeBSD.org
COMMENT=	A viewer and editor for multiple sequence alignments

USE_JAVA=	yes
JAVA_VERSION=	1.6+
USE_ANT=	yes
ALL_TARGET=	makejars
WRKSRC=		${WRKDIR}/${PORTNAME}

DATADIR=	${JAVASHAREDIR}/${PORTNAME}
SUB_FILES=	jalview.sh

do-install:
	${INSTALL_SCRIPT} ${WRKDIR}/jalview.sh ${PREFIX}/bin/jalview
	@@${MKDIR} ${DATADIR}
	${INSTALL_DATA} ${WRKSRC}/dist/* ${DATADIR}

.include <bsd.port.mk>
@


1.6
log
@Switch exporter over
@
text
@d2 1
a2 1
# $FreeBSD: head/biology/jalview/Makefile 305130 2012-10-01 14:45:16Z tabthorpe $
d15 1
a15 1
JAVA_VERSION=	1.5+
@


1.5
log
@SVN rev 305130 on 2012-10-01 14:45:16Z by tabthorpe

- Reassign to the heap at maintainer's request
@
text
@d2 1
a2 1
# $FreeBSD$
@


1.4
log
@Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon,
remove support for them from bsd.java.mk.  As Jikes is not available in Java 1.5
or higher, remove it from bsd.java.mk too (suggested by hq@@) and from the ports
which used it (only occurences were USE_JIKES=no).  Support for the Blackdown VM
is also removed, as it is not available in Java 1.5 and higher.

Also remove the mapping from Java 1.1-1.4 to Java 1.5+ in bsd.java.mk to detect
old, broken ports; therefore bump the minimal value of JAVA_VERSION to 1.5.
While here, replace static values of JAVA_VERSION in files/*.in by
%%JAVA_VERSION%% .

PR:		ports/158969
Submitted by:	rene
Tested on:	pointyhat-west -exp
@
text
@d1 1
a1 4
# New ports collection makefile for:	jalview
# Date created:				11 Jan 2006
# Whom:					Fernan Aguero <fernan@@iib.unsam.edu.ar>
#
a2 1
#
d11 1
a11 1
MAINTAINER=	fernan@@iib.unsam.edu.ar
@


1.3
log
@Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@@
Approved by:    portmgr (pav)
@
text
@d19 1
a19 1
JAVA_VERSION=	1.4+
@


1.2
log
@- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
@
text
@d10 1
a10 1
PORTREVISION=	1
@


1.1
log
@Jalview is a multiple alignment editor written in Java. It is used widely in a
variety of web pages (e.g. the EBI Clustalw server and the Pfam protein domain
database) and is also available as a general purpose alignment editor.

WWW: http://www.jalview.org

PR:		93054
Submitted by:	Fernan Aguero <fernan@@iib.unsam.edu.ar>
@
text
@d10 1
@

