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1.2
date	2006.03.19.12.59.16;	author garga;	state dead;
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1.1
date	2006.03.15.10.41.16;	author garga;	state Exp;
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desc
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1.2
log
@- Update to 5.743
- Add a MASTER_SITE backup since oficial one just have last version and make
  it fetchable again

Submitted by:	maintainer by email
Reported by:	krismail
@
text
@--- src/Makefile.orig	Wed Aug 31 06:58:17 2005
+++ src/Makefile	Sun Feb  5 01:07:37 2006
@@@@ -1,8 +1,7 @@@@
-PREFIX = \/usr\/local\/lib\/mafft
 #CC = gcc  -O2  -g -pg -static
 #CC = gcc    -mno-cygwin -O3
 #CC = gcc -O3   -mcpu=970 -mtune=970 -mpowerpc64 -mpowerpc-gpopt -falign-loops=16 -falign-functions=16 -falign-labels=16 -falign-jumps=16
-CC = gcc -O3 
+#CC = gcc -O3 
 #CC = gcc  -g -O0 
 PROGS = dvtditr dndfast7 dndblast sextet5 pairalign pairlocalalign \
         disttbfast tbfast tbfast2 mafft-profile f2cl \
@@@@ -71,19 +70,19 @@@@
 	@@echo done.
 
 fftns: fftns.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" fftns.tmpl  > fftns
+	sed "s,_PREFIX,$(PREFIX)," fftns.tmpl  > fftns
 fftnsi: fftnsi.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" fftnsi.tmpl > fftnsi
+	sed "s,_PREFIX,$(PREFIX)," fftnsi.tmpl > fftnsi
 fftnsrough: fftnsrough.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" fftnsrough.tmpl  > fftnsrough
+	sed "s,_PREFIX,$(PREFIX)," fftnsrough.tmpl  > fftnsrough
 nwns: nwns.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" nwns.tmpl   > nwns
+	sed "s,_PREFIX,$(PREFIX)," nwns.tmpl   > nwns
 nwnsi: nwnsi.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" nwnsi.tmpl  > nwnsi
+	sed "s,_PREFIX,$(PREFIX)," nwnsi.tmpl  > nwnsi
 nwnsrough: nwnsrough.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" nwnsrough.tmpl  > nwnsrough
+	sed "s,_PREFIX,$(PREFIX)," nwnsrough.tmpl  > nwnsrough
 mafft: mafft.tmpl
-	sed "s/_PREFIX/$(PREFIX)/" mafft.tmpl  > mafft
+	sed "s,_PREFIX,$(PREFIX)," mafft.tmpl  > mafft
 
 mltaln.h : functions.h
 	touch mltaln.h
@


1.1
log
@Add mafft 5.734, multiple sequence alignments based on fast Fourier
transform.

PR:		ports/93059
Submitted by:	Fernan Aguero <fernan@@iib.unsam.edu.ar>
@
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