head	1.3;
access;
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	RELEASE_9_0_0:1.2
	RELEASE_7_4_0:1.2
	RELEASE_8_2_0:1.2
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	RELEASE_8_1_0:1.2
	RELEASE_7_3_0:1.2
	RELEASE_8_0_0:1.2
	RELEASE_7_2_0:1.2
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locks; strict;
comment	@# @;


1.3
date	2012.08.07.12.26.39;	author scheidell;	state Exp;
branches;
next	1.2;

1.2
date	2006.03.19.12.59.16;	author garga;	state Exp;
branches;
next	1.1;

1.1
date	2006.03.15.10.41.16;	author garga;	state Exp;
branches;
next	;


desc
@@


1.3
log
@SVN rev 302236 on 2012-08-07 12:26:39Z by scheidell

- Update to version 6.903

PR:		ports/169920
Submitted by:	"Reed A. Cartwright" <cartwright@@asu.edu>
Approved by:	maintainer (timeout, 21 days)
@
text
@bin/einsi
bin/fftns
bin/fftnsi
bin/ginsi
bin/linsi
bin/mafft
bin/mafft-distance
bin/mafft-einsi
bin/mafft-fftns
bin/mafft-fftnsi
bin/mafft-ginsi
bin/mafft-homologs.rb
bin/mafft-linsi
bin/mafft-nwns
bin/mafft-nwnsi
bin/mafft-profile
bin/mafft-qinsi
bin/mafft-xinsi
bin/nwns
bin/nwnsi
libexec/mafft/addsingle
libexec/mafft/contrafoldwrap
libexec/mafft/countlen
libexec/mafft/disttbfast
libexec/mafft/dndblast
libexec/mafft/dndfast7
libexec/mafft/dndpre
libexec/mafft/dndpre2
libexec/mafft/dvtditr
libexec/mafft/f2cl
libexec/mafft/getlag
libexec/mafft/mafft-distance
libexec/mafft/mafft-profile
libexec/mafft/makedirectionlist
libexec/mafft/mccaskillwrap
libexec/mafft/multi2hat3s
libexec/mafft/pair2hat3s
libexec/mafft/pairash
libexec/mafft/pairlocalalign
libexec/mafft/regtable2seq
libexec/mafft/replaceu
libexec/mafft/restoreu
libexec/mafft/rnatest
libexec/mafft/score
libexec/mafft/seq2regtable
libexec/mafft/setcore
libexec/mafft/setdirection
libexec/mafft/sextet5
libexec/mafft/splittbfast
libexec/mafft/tbfast
libexec/mafft/version
%%PORTDOCS%%%%DOCSDIR%%/license
%%PORTDOCS%%%%DOCSDIR%%/readme
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.dpparttree
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.fftns2
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.fftnsi
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.gins1
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.ginsi
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.lins1
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.linsi
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/sample.parttree
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/samplerna
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/samplerna.qinsi
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/samplerna.xinsi
%%PORTEXAMPLES%%@@dirrm %%EXAMPLESDIR%%
%%PORTDOCS%%@@dirrm %%DOCSDIR%%
@@dirrm libexec/mafft
@


1.2
log
@- Update to 5.743
- Add a MASTER_SITE backup since oficial one just have last version and make
  it fetchable again

Submitted by:	maintainer by email
Reported by:	krismail
@
text
@d1 5
a5 1
bin/dummy
d7 9
a15 8
bin/disttbfast
bin/dndblast
bin/dndfast7
bin/dndpre
bin/dndpre2
bin/dvtditr
bin/f2cl
bin/getlag
d17 36
a52 10
bin/multi2hat3s
bin/pair2hat3s
bin/pairalign
bin/pairlocalalign
bin/score
bin/setcore
bin/sextet5
bin/splitseq
bin/tbfast
bin/tbfast2
d54 13
a66 7
%%EXAMPLESDIR%%/sample
%%EXAMPLESDIR%%/sample.fftns2
%%EXAMPLESDIR%%/sample.fftnsi
%%EXAMPLESDIR%%/sample.gins1
%%EXAMPLESDIR%%/sample.ginsi
%%EXAMPLESDIR%%/sample.lins1
%%EXAMPLESDIR%%/sample.linsi
d68 1
a68 1
@@dirrm %%EXAMPLESDIR%%
@


1.1
log
@Add mafft 5.734, multiple sequence alignments based on fast Fourier
transform.

PR:		ports/93059
Submitted by:	Fernan Aguero <fernan@@iib.unsam.edu.ar>
@
text
@d1 1
d12 2
@

