head	1.4;
access;
symbols
	RELEASE_8_3_0:1.3
	RELEASE_9_0_0:1.3
	RELEASE_7_4_0:1.3
	RELEASE_8_2_0:1.3
	RELEASE_6_EOL:1.3
	RELEASE_8_1_0:1.3
	RELEASE_7_3_0:1.3
	RELEASE_8_0_0:1.3
	RELEASE_7_2_0:1.2
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locks; strict;
comment	@# @;


1.4
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.3;

1.3
date	2009.05.12.11.28.15;	author itetcu;	state Exp;
branches;
next	1.2;

1.2
date	2008.05.17.16.52.34;	author pav;	state Exp;
branches;
next	1.1;

1.1
date	2007.12.15.15.13.40;	author miwi;	state Exp;
branches;
next	;


desc
@@


1.4
log
@Switch exporter over
@
text
@# New ports collection makefile for:	mrbayes
# Date created:				11 December 2007
# Whom:					mzaki@@biol.s.u-tokyo.ac.jp
#
# $FreeBSD: head/biology/mrbayes/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	mrbayes
PORTVERSION=	3.1.2
PORTREVISION=	1
CATEGORIES=	biology
MASTER_SITES=	SF

MAINTAINER=	mzaki@@m.u-tokyo.ac.jp
COMMENT=	Bayesian inference of phylogeny

USE_GMAKE=	yes

LIB_DEPENDS+=	readline.6:${PORTSDIR}/devel/readline

PLIST_FILES=	bin/mb

PORTEXAMPLES=	adh.nex anolis.nex avian_ovomucoids.nex bglobin.nex \
		cynmix.nex kim.nex primates.nex replicase.nex

do-install:
	@@${INSTALL_PROGRAM} ${WRKSRC}/mb ${PREFIX}/bin/
.if !defined(NOPORTEXAMPLES)
	@@${MKDIR} ${EXAMPLESDIR}
.for file in ${PORTEXAMPLES}
	@@${INSTALL_DATA} ${WRKSRC}/${file} ${EXAMPLESDIR}
.endfor
.endif

.include <bsd.port.mk>
@


1.3
log
@Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from
5 to 6.

Forgotten by:	araujo@@
Reported by:	QAT
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.2
log
@- Update maintainer's email address

Submitted by:	Motomichi Matsuzaki <mzaki@@m.u-tokyo.ac.jp> (maintainer)
@
text
@d10 1
d19 1
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LIB_DEPENDS+=	readline.5:${PORTSDIR}/devel/readline
@


1.1
log
@MrBayes is a program for the Bayesian estimation of phylogeny.

Bayesian inference of phylogeny is based upon a quantity called the
posterior probability distribution of trees, which is the probability of a
tree conditioned on the observations. The conditioning is accomplished
using Bayes's theorem. The posterior probability distribution of trees is
impossible to calculate analytically; instead, MrBayes uses a simulation
technique called Markov chain Monte Carlo (or MCMC) to approximate the
posterior probabilities of trees.

WWW: http://mrbayes.csit.fsu.edu/

PR:		ports/118542
Submitted by:	mzaki at biol.s.u-tokyo.ac.jp
@
text
@d13 1
a13 1
MAINTAINER=	mzaki@@biol.s.u-tokyo.ac.jp
@

