head	1.6;
access;
symbols
	RELEASE_8_3_0:1.5
	RELEASE_9_0_0:1.4
	RELEASE_7_4_0:1.4
	RELEASE_8_2_0:1.4
	RELEASE_6_EOL:1.4
	RELEASE_8_1_0:1.4
	RELEASE_7_3_0:1.3
	RELEASE_8_0_0:1.2
	RELEASE_7_2_0:1.1
	RELEASE_7_1_0:1.1
	RELEASE_6_4_0:1.1
	RELEASE_5_EOL:1.1;
locks; strict;
comment	@# @;


1.6
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.5;

1.5
date	2012.01.17.00.51.39;	author sylvio;	state Exp;
branches;
next	1.4;

1.4
date	2010.03.21.17.18.20;	author sylvio;	state Exp;
branches;
next	1.3;

1.3
date	2009.11.27.22.52.17;	author sylvio;	state Exp;
branches;
next	1.2;

1.2
date	2009.08.28.14.52.05;	author araujo;	state Exp;
branches;
next	1.1;

1.1
date	2007.12.14.20.54.47;	author miwi;	state Exp;
branches;
next	;


desc
@@


1.6
log
@Switch exporter over
@
text
@# ex:ts=8
# New ports collection makefile for:	MUMmer
# Date created:				20 November 2007
# Whom:					Tony Maher
#
# $FreeBSD: head/biology/mummer/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	mummer
PORTVERSION=	3.23
CATEGORIES=	biology
MASTER_SITES=	SF
DISTNAME=	MUMmer${PORTVERSION}

MAINTAINER=	sylvio@@FreeBSD.org
COMMENT=	A modular system for rapid whole genome alignment

USE_GMAKE=	yes

PROGRAMS=	annotate combineMUMs delta-filter gaps \
		mgaps mummer repeat-match show-aligns \
		show-coords show-diff show-snps show-tiling
SCRIPTS=	dnadiff exact-tandems mapview mummerplot nucmer \
		nucmer2xfig promer run-mummer1 run-mummer3
DOCUMENTS=	COPYRIGHT INSTALL LICENSE README

do-install:
.for program in ${PROGRAMS}
	(cd ${WRKSRC} && ${INSTALL_PROGRAM} ${program} ${PREFIX}/bin)
.endfor

.for script in ${SCRIPTS}
	(cd ${WRKSRC} && ${INSTALL_SCRIPT} ${script} ${PREFIX}/bin)
.endfor

.if !defined(NOPORTDOCS)
	@@${MKDIR} ${DOCSDIR}
.for doc in ${DOCUMENTS}
	(cd ${WRKSRC} && ${INSTALL_DATA} ${doc} ${DOCSDIR})
.endfor
.endif

.include <bsd.port.mk>
@


1.5
log
@- Update to 3.23
@
text
@d6 1
a6 1
# $FreeBSD$
@


1.4
log
@- Update to 3.22

Approved by: 	itetcu (mentor)
@
text
@d10 1
a10 1
PORTVERSION=	3.22
@


1.3
log
@- Update my mail address to FreeBSD

Approved by:	miwi (mentor)
@
text
@d10 1
a10 1
PORTVERSION=	3.21
@


1.2
log
@- Update to 3.21.
- Reset maintainer to submitter.

PR:		ports/138192
Submitted by:	Sylvio Cesar <scjamorim@@bsd.com.br>
@
text
@d15 1
a15 1
MAINTAINER=	scjamorim@@bsd.com.br
@


1.1
log
@MUMmer is a modular system for the rapid whole genome alignment of finished
or draft sequence. This package provides an efficient suffix tree library,
seed-and-extend alignment, SNP detection, repeat detection, and
visualization tools.

WWW:	http://mummer.sourceforge.net/

PR:		ports/118142
Submitted by:	Tony Maher
@
text
@d10 1
a10 1
PORTVERSION=	3.20
d15 1
a15 1
MAINTAINER=	Anthony.Maher@@uts.edu.au
@

