head	1.6;
access;
symbols
	RELEASE_5_EOL:1.5
	RELEASE_7_0_0:1.5
	RELEASE_6_3_0:1.5
	PRE_XORG_7:1.5
	RELEASE_4_EOL:1.5
	RELEASE_6_2_0:1.4
	RELEASE_6_1_0:1.4
	RELEASE_5_5_0:1.4
	RELEASE_6_0_0:1.4
	RELEASE_5_4_0:1.3
	RELEASE_4_11_0:1.3
	RELEASE_5_3_0:1.3
	RELEASE_4_10_0:1.2
	RELEASE_5_2_1:1.2
	RELEASE_5_2_0:1.2
	RELEASE_4_9_0:1.1;
locks; strict;
comment	@# @;


1.6
date	2008.07.24.12.17.11;	author pav;	state dead;
branches;
next	1.5;

1.5
date	2006.12.23.21.45.17;	author miwi;	state Exp;
branches;
next	1.4;

1.4
date	2005.04.28.19.01.41;	author jylefort;	state Exp;
branches;
next	1.3;

1.3
date	2004.07.02.09.53.25;	author vs;	state Exp;
branches;
next	1.2;

1.2
date	2003.10.14.12.18.51;	author daichi;	state Exp;
branches;
next	1.1;

1.1
date	2003.07.08.11.50.36;	author daichi;	state Exp;
branches;
next	;


desc
@@


1.6
log
@- Delete biology/nab port after being marked DEPRECATED for three months

PR:		ports/125891
Submitted by:	M. L. Dodson <mldodson@@comcast.net> (maintainer)
@
text
@--- Makefile.orig	Mon Aug 21 11:16:05 2006
+++ Makefile	Fri Dec 15 16:06:57 2006
@@@@ -2,31 +2,32 @@@@
 
 include config.h
 
+all: install
+
 install:
 	-mkdir $(BINDIR) $(LIBDIR) $(INCDIR)
-	(cd ucpp-1.3; make $(UCPP) )
-	(cd byacc; make install )
-
-#   here are the Fortran versions:
-#	(cd lapack; make $(LAPACK) )
-#	(cd blas; make $(BLAS) )
-
-#   here are the C versions:
-	(cd clapack; make $(LAPACK) )
-	(cd cblas; make $(BLAS) )
-	(cd f2c;  make $(F2C)  )
-
-	(cd cifparse; make install )
-	(cd src; make install )
-	(cd nss; make install )
-	(cd tleap; make install )
+	(cd clapack; env NABHOME=.. make $(LAPACK) )
+	(cd cblas; env NABHOME=.. make $(BLAS) )
+	(cd f2c; env NABHOME=.. make $(F2C) )
+	(cd cifparse; env NABHOME=.. make install )
+	(cd src; env NABHOME=.. make install )
+	(cd nss; env NABHOME=.. make install )
+	(cd tleap; env NABHOME=.. make install )
+#	(cd peptide && \
+#		env NABHOME=.. ../bin/nab $(CFLAGS) -o peptide peptide.nab )
+#	cp -p peptide/README doc/README-peptide
+#	mv peptide/peptide bin
+#	@@echo
+#	@@echo "Ignore conflicting types warnings"
+#	@@echo
+#	(cd suppose; env NABHOME=.. make all )
+#	cp -p suppose/suppose.1 doc
+#	mv suppose/suppose suppose/PCA_suppose bin
 	@@echo
-	@@echo "completed installation of NAB version 5"
+	@@echo "completed installation of NAB version 5.1"
 	@@echo
 
 clean:
-	(cd ucpp-1.3; make clean )
-	(cd byacc; make clean )
 	(cd cifparse; make clean )
 	(cd src; make clean )
 	(cd nss; make clean )
@@@@ -34,10 +35,12 @@@@
 	(cd cblas; make clean )
 	(cd clapack; make clean )
 	(cd f2c; make clean )
-	
+	(cd suppose; make clean )
+	(cd peptide && rm -f peptide.c peptide )
+
 #   note:  "make test" needs to follow "make", since it is very hard to
 #          tell if the compiler is completely "made" or not.
 
 test::
-	(cd test; make test)
-	(cd nss; make test)
+	(cd test; env NABHOME=.. make test)
+	(cd nss; env NABHOME=.. make test)
@


1.5
log
@- Update to 5.1.2
- Update maintainer mail adresse

PR:		ports/107118
Submitted by:	M. L. Dodson <bdodson@@houston.rr.com> (maintainer)
@
text
@@


1.4
log
@- Update to 5.0
- Cleanups

PR:		ports/80372
Submitted by:	maintainer
@
text
@d1 3
a3 3
--- Makefile.orig	Thu Apr  7 20:18:20 2005
+++ Makefile	Mon Apr 25 13:37:39 2005
@@@@ -2,42 +2,39 @@@@
d7 1
a7 1
+all: install test
d11 1
a11 1
-	(cd ucpp-1.3; make install )
d13 10
a22 2
-	(cd lapack; make $(LAPACK) )
-	(cd blas; make $(BLAS) )
d27 3
a29 2
+	(cd lapack; env NABHOME=.. make $(LAPACK) )
+	(cd blas; env NABHOME=.. make $(BLAS) )
d34 10
d45 2
a46 1
 	@@echo "completed installation of NAB version 5"
d55 4
a58 13
 	(cd tleap; make clean )
 	(cd lapack; make clean )
 	(cd blas; make clean )
-	
+
 uninstall: clean
-	(cd ucpp-1.3; make uninstall )
 	(cd cifparse; make uninstall )
 	(cd src; make uninstall )
 	(cd nss; make uninstall )
 	(cd tleap; make uninstall )
 	-/bin/rm config.h
 	-rm -rf $(BINDIR) $(LIBDIR) $(INCDIR)
d60 2
@


1.3
log
@Update to 4.6

PR:		ports/68561
Submitted by:	maintainer
@
text
@d1 3
a3 4
--- Makefile.orig	Tue May 18 15:46:55 2004
+++ Makefile	Thu Jul  1 09:03:32 2004
@@@@ -1,16 +1,15 @@@@
 #   top-level Makefile for the NAB suite of programs
d5 6
a10 3
+all:	compiler test
 compiler:
 	-mkdir bin lib include
d13 15
a27 15
 	(cd cifparse; make install )
 	(cd src; make install )
 	(cd nss; make install )
 	(cd tleap; make install )
-	@@echo
-	@@echo "completed installation of NAB version 4"
-	@@echo
+#	@@echo
+#	@@echo "completed installation of NAB version 4"
+#	@@echo
 
 #   note:  "make test" needs to follow "make", since it is very hard to
 #          tell if the compiler is completely "made" or not.
@@@@ -19,18 +18,15 @@@@
 	(cd nss; make test )
d36 2
d40 1
a40 1
 uninstall:
d47 1
d50 8
@


1.2
log
@update biology/nab: 4.5.1 -> 4.5.2

PR:		57970
Submitted by:	M. L. Dodson <bdodson@@scms.utmb.edu> (maintainer)
@
text
@d1 3
a3 3
--- Makefile.orig	Tue Jul 15 21:11:15 2003
+++ Makefile	Sat Aug  9 13:50:34 2003
@@@@ -1,15 +1,15 @@@@
d6 1
a6 1
+all: compiler test
d10 1
d24 1
a24 1
@@@@ -18,14 +18,12 @@@@
d29 1
d34 2
a35 1
 	
d41 4
@


1.1
log
@update biology/nab: 4.4 -> 4.5.1

PR:		52786
Submitted by:	M. L. Dodson <bdodson@@scms.utmb.EDU> (maintainer)
@
text
@d1 2
a2 2
--- Makefile.orig	Mon Oct 23 20:33:23 2000
+++ Makefile	Wed Feb 12 16:33:42 2003
d9 1
a9 1
-	(cd ucpp-0.7; make install )
d23 1
a23 1
@@@@ -18,17 +18,14 @@@@
d27 1
a27 1
-	(cd ucpp-0.7; make clean )
d34 1
a34 1
-	(cd ucpp-0.7; make uninstall )
a37 3
 	(cd tleap; make uninstall )
 	-/bin/rm config.h
-	
@

