head	1.5;
access;
symbols
	RELEASE_8_3_0:1.4
	RELEASE_9_0_0:1.4
	RELEASE_7_4_0:1.3
	RELEASE_8_2_0:1.3
	RELEASE_6_EOL:1.3
	RELEASE_8_1_0:1.3
	RELEASE_7_3_0:1.3
	RELEASE_8_0_0:1.3
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locks; strict;
comment	@# @;


1.5
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.4;

1.4
date	2011.05.02.12.44.27;	author makc;	state Exp;
branches;
next	1.3;

1.3
date	2009.06.09.15.32.53;	author amdmi3;	state Exp;
branches;
next	1.2;

1.2
date	2008.05.17.16.52.34;	author pav;	state Exp;
branches;
next	1.1;

1.1
date	2008.05.14.14.07.00;	author pav;	state Exp;
branches;
next	;


desc
@@


1.5
log
@Switch exporter over
@
text
@# New ports collection makefile for:	njplot
# Date created:		5 December 2007
# Whom:			Motomichi Matsuzaki <mzaki@@biol.s.u-tokyo.ac.jp>
#
# $FreeBSD: head/biology/njplot/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	njplot
PORTVERSION=	2.1
PORTREVISION=	2
CATEGORIES=	biology
MASTER_SITES=	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/

MAINTAINER=	mzaki@@m.u-tokyo.ac.jp
COMMENT=	Phylogenetic tree drawing program capable of interactive manipulation

.ifndef (WITHOUT_X11)
BUILD_DEPENDS=	${LOCALBASE}/lib/ncbi/libvibrant.a:${PORTSDIR}/biology/ncbi-toolkit
USE_XORG=	x11 xt xmu xp
USE_MOTIF=	yes
.endif

MAKEFILE=	makefile

BINARIES=	newicktops newicktotxt
.ifndef (WITHOUT_X11)
BINARIES+=	njplot unrooted
.endif
.for file in ${BINARIES}
PLIST_FILES+=	bin/${file}
.endfor

PORTDOCS=	njplot.help njplot.html njplot.gif

MAN1=		njplot.1 unrooted.1

.ifdef (WITHOUT_X11)
post-patch:
	${REINPLACE_CMD} -e 's|njplot.*unrooted||' ${WRKSRC}/makefile
.endif

do-install:
.for file in ${BINARIES}
	${INSTALL_PROGRAM} ${WRKSRC}/${file} ${PREFIX}/bin
.endfor
.for file in ${MAN1}
	${INSTALL_MAN} ${WRKSRC}/${file} ${PREFIX}/man/man1
.endfor
.if !defined(NOPORTDOCS)
	${MKDIR} ${DOCSDIR}
.for file in ${PORTDOCS}
	${INSTALL_MAN} ${WRKSRC}/${file} ${DOCSDIR}
.endfor
.endif

.include <bsd.port.mk>
@


1.4
log
@Bump PORTREVISION after open-mofit update
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.3
log
@Convert most of remaining ports that depend on xorg-libraries to
modular xorg.

- supply corresponding USE_XORG for all imake-using ports that need it
- USE_IMAKE no longer implies USE_XLIB in absence of USE_XORG
- retire USE_X_PREFIX which is not really used anywhere after the
  above change
- a few minor nits like whitespace and SF macro

Tested by:	2 tinderbox runs by pav
Approved by:	portmgr (pav)
@
text
@d10 1
a10 1
PORTREVISION=	1
@


1.2
log
@- Update maintainer's email address

Submitted by:	Motomichi Matsuzaki <mzaki@@m.u-tokyo.ac.jp> (maintainer)
@
text
@d10 1
d19 1
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USE_XLIB=	yes
@


1.1
log
@NJplot is a tree drawing program able to draw any phylogenetic tree expressed
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
package). NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building methods.

The package contains the following programs:
njplot      - draw phylogenetic trees and interactively modify them
newicktops  - non-interactive version rendering into a PostScript file
newicktotxt - non-interactive version rendering into a text file
unrooted    - draw unrooted circular trees

If you use NJplot in a published work, please cite the following reference:

Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
biological sequence banks. Biochimie, 78, 364-369.

WWW: http://pbil.univ-lyon1.fr/software/njplot.html

PR:		ports/118438
Submitted by:	Motomichi Matsuzaki <mzaki@@biol.s.u-tokyo.ac.jp>
@
text
@d13 1
a13 1
MAINTAINER=	mzaki@@biol.s.u-tokyo.ac.jp
@

