head	1.29;
access;
symbols
	RELEASE_8_3_0:1.26
	RELEASE_9_0_0:1.26
	RELEASE_7_4_0:1.26
	RELEASE_8_2_0:1.26
	RELEASE_6_EOL:1.26
	RELEASE_8_1_0:1.26
	RELEASE_7_3_0:1.26
	RELEASE_8_0_0:1.23
	RELEASE_7_2_0:1.21
	RELEASE_7_1_0:1.19
	RELEASE_6_4_0:1.19
	RELEASE_5_EOL:1.18
	RELEASE_7_0_0:1.17
	RELEASE_6_3_0:1.17
	PRE_XORG_7:1.16
	RELEASE_4_EOL:1.16
	RELEASE_6_2_0:1.14
	RELEASE_6_1_0:1.13
	RELEASE_5_5_0:1.13
	RELEASE_6_0_0:1.13
	RELEASE_5_4_0:1.12
	RELEASE_4_11_0:1.12
	RELEASE_5_3_0:1.12
	RELEASE_4_10_0:1.12
	RELEASE_5_2_1:1.11
	RELEASE_5_2_0:1.11
	RELEASE_4_9_0:1.10
	RELEASE_5_1_0:1.9
	RELEASE_4_8_0:1.9
	RELEASE_5_0_0:1.7
	RELEASE_4_7_0:1.6
	RELEASE_4_6_2:1.6
	RELEASE_4_6_1:1.6
	RELEASE_4_6_0:1.6
	RELEASE_5_0_DP1:1.6
	RELEASE_4_5_0:1.5
	RELEASE_4_4_0:1.5
	RELEASE_4_3_0:1.4
	RELEASE_4_2_0:1.2
	RELEASE_4_1_1:1.1;
locks; strict;
comment	@# @;


1.29
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.28;

1.28
date	2012.06.10.18.41.15;	author swills;	state Exp;
branches;
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1.27
date	2012.06.04.08.31.12;	author az;	state Exp;
branches;
next	1.26;

1.26
date	2010.01.29.14.52.20;	author kuriyama;	state Exp;
branches;
next	1.25;

1.25
date	2010.01.16.14.45.41;	author kuriyama;	state Exp;
branches;
next	1.24;

1.24
date	2009.12.13.18.07.41;	author pgollucci;	state Exp;
branches;
next	1.23;

1.23
date	2009.07.07.22.11.07;	author pav;	state Exp;
branches;
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1.22
date	2009.05.16.06.27.42;	author pgollucci;	state Exp;
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1.21
date	2009.01.05.17.27.23;	author pav;	state Exp;
branches;
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1.20
date	2008.12.24.08.23.14;	author pgollucci;	state Exp;
branches;
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1.19
date	2008.07.23.02.43.46;	author pgollucci;	state Exp;
branches;
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1.18
date	2008.04.17.14.24.10;	author araujo;	state Exp;
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1.17
date	2007.09.08.00.53.10;	author linimon;	state Exp;
branches;
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1.16
date	2006.12.04.04.13.30;	author rafan;	state Exp;
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1.15
date	2006.11.27.02.35.16;	author rafan;	state Exp;
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1.14
date	2006.05.02.23.16.02;	author leeym;	state Exp;
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1.13
date	2005.04.11.20.34.36;	author flz;	state Exp;
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1.12
date	2004.03.07.12.56.26;	author kris;	state Exp;
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1.11
date	2003.10.24.12.01.16;	author ijliao;	state Exp;
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1.10
date	2003.06.17.18.39.47;	author erwin;	state Exp;
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1.9
date	2003.02.21.11.01.35;	author knu;	state Exp;
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1.8
date	2003.02.13.02.52.13;	author edwin;	state Exp;
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1.7
date	2002.10.10.12.59.31;	author knu;	state Exp;
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1.6
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1.5
date	2001.08.13.11.27.35;	author wjv;	state Exp;
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1.4
date	2001.03.13.14.50.12;	author kevlo;	state Exp;
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1.3
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1.2
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1.1
date	2000.07.28.13.16.10;	author nbm;	state Exp;
branches;
next	;


desc
@@


1.29
log
@Switch exporter over
@
text
@# New ports collection makefile for:	p5-AcePerl
# Date created:		26 July 2000
# Whom:	      		Johann Visagie <johann@@egenetics.com>
#
# $FreeBSD: head/biology/p5-AcePerl/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	AcePerl
PORTVERSION=	1.92
PORTREVISION=	2
CATEGORIES=	biology databases perl5
MASTER_SITES=	CPAN
MASTER_SITE_SUBDIR=	Ace
PKGNAMEPREFIX=	p5-

MAINTAINER=	perl@@FreeBSD.org
COMMENT=	Perl5 interface to the ACEDB genome database system

RUN_DEPENDS=	p5-Cache-Cache>=0:${PORTSDIR}/devel/p5-Cache-Cache
BUILD_DEPENDS:=	${RUN_DEPENDS}

MAKE_JOBS_UNSAFE=  yes

PERL_CONFIGURE=	yes

MAN1=		ace.pl.1
MAN3=		Ace.3 Ace::Browser::AceSubs.3 Ace::Browser::SearchSubs.3 \
		Ace::Browser::SiteDefs.3 Ace::Graphics::Fk.3 \
		Ace::Graphics::Glyph.3 Ace::Graphics::Glyph::anchored_arrow.3 \
		Ace::Graphics::Glyph::arrow.3 Ace::Graphics::Glyph::box.3 \
		Ace::Graphics::Glyph::dot.3 Ace::Graphics::Glyph::ex.3 \
		Ace::Graphics::Glyph::graded_segments.3 \
		Ace::Graphics::Glyph::group.3 Ace::Graphics::Glyph::line.3 \
		Ace::Graphics::Glyph::primers.3 \
		Ace::Graphics::Glyph::segments.3 Ace::Graphics::Glyph::span.3 \
		Ace::Graphics::Glyph::toomany.3 \
		Ace::Graphics::Glyph::transcript.3 \
		Ace::Graphics::Glyph::triangle.3 \
		Ace::Graphics::GlyphFactory.3 Ace::Graphics::Panel.3 \
		Ace::Graphics::Track.3 Ace::Iterator.3 Ace::Local.3 \
		Ace::Model.3 Ace::Object.3 Ace::Sequence.3 \
		Ace::Sequence::Feature.3 Ace::Sequence::FeatureList.3 \
		Ace::Sequence::GappedAlignment.3 Ace::Sequence::Gene.3 \
		Ace::Sequence::Homol.3 Ace::Sequence::Multi.3 \
		Ace::Sequence::Transcript.3

.include <bsd.port.pre.mk>

.if ${ARCH} == "amd64" || ${ARCH} == "ia64"
CFLAGS+=	-fPIC
.endif

post-patch:
	@@ ${SED} -e 's|XX__CC__XX|${CC}|' < ${FILESDIR}/FREEBSD_DEF \
	  > ${WRKSRC}/acelib/wmake/FREEBSD_DEF

.include <bsd.port.post.mk>
@


1.28
log
@- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or
  RUN_DEPENDS=${BUILD_DEPENDS} to use := which portlint has warned
  about for a while.

PR:		ports/168208
Approved by:	portmgr (miwi)
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.27
log
@- Remove SITE_PERL from *_DEPENDS
@
text
@d20 1
a20 1
BUILD_DEPENDS=	${RUN_DEPENDS}
@


1.26
log
@- Remove unneeded dependencies which is in perl-5.8.9 dist
  (part 19; last!).

Approved by:	portmgr (itetcu)
@
text
@d19 1
a19 1
RUN_DEPENDS=	${SITE_PERL}/Cache/Cache.pm:${PORTSDIR}/devel/p5-Cache-Cache
@


1.25
log
@- Remove unneeded dependencies which is in perl-5.8.9 dist from ports
  maintained by (perl|ports|kuriyama)@@FreeBSD.org.

- Targets are: Test::Simple, Digest::MD5, Locale-Maketext,
  ExtUtils::MakeMaker, ExtUtils::ParseXS, File::Temp, Getopt::Long,
  Encode, Digest, Pod::Parser, File::Spec.
@
text
@d10 1
a10 1
PORTREVISION=	1
d19 1
a19 2
RUN_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/Scalar/Util.pm:${PORTSDIR}/lang/p5-Scalar-List-Utils \
		${SITE_PERL}/Cache/Cache.pm:${PORTSDIR}/devel/p5-Cache-Cache
@


1.24
log
@- Turn over a bunch of p5- ports that change infrequently to perl@@
  so more people can look at them.
@
text
@d10 1
d19 1
a19 2
RUN_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/Digest/MD5.pm:${PORTSDIR}/security/p5-Digest-MD5 \
		${SITE_PERL}/${PERL_ARCH}/Scalar/Util.pm:${PORTSDIR}/lang/p5-Scalar-List-Utils \
@


1.23
log
@- Flip MAKE_JOBS_SAFE to MAKE_JOBS_UNSAFE

Reported by:	pointyhat
@
text
@d15 1
a15 1
MAINTAINER=	pgollucci@@FreeBSD.org
@


1.22
log
@- Mark most of my ports MAKE_JOBS_SAFE=yes

Tested by: several builds in P6 TB
@
text
@d23 1
a23 1
MAKE_JOBS_SAFE=  yes
@


1.21
log
@- Remove conditional checks relevant only on FreeBSD 5.x and older
@
text
@d23 2
@


1.20
log
@Update to 1.92
Changes http://search.cpan.org/src/LDS/AcePerl-1.92/ChangeLog

Approved by:    gabor (mentor)
@
text
@a51 4
.if ${ARCH} == "amd64" && ${OSVERSION} < 600000
BROKEN=		does not compile, GCC bug
.endif

@


1.19
log
@Update my ports to my freebsd address

Approved by:    araujo (mentor)
@
text
@d9 1
a9 1
PORTVERSION=	1.91
@


1.18
log
@- Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN.

PR:		ports/122674
Submitted by:	Philip M. Gollucci <pgollucci@@p6m7g8.com>
Reworked by:	araujo (myself)
Approved by:	portmgr (pav)
@
text
@d15 1
a15 1
MAINTAINER=	pgollucci@@p6m7g8.com
@


1.17
log
@Welcome bsd.perl.mk.  Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.

Work done by:	gabor
Sponsored by:	Google Summer of Code 2007
Hat:		portmgr
@
text
@d11 1
a11 1
MASTER_SITES=	${MASTER_SITE_PERL_CPAN}
@


1.16
log
@- Mark broken on amd64 < 6. We got following

cc -O -pipe  -fPIC  -g -Wall -DACEDB4  -I. -I./wh -DFREEBSD -c -O -pipe  -fPIC  -g -Wall -DACEDB4 -c arraysub.c
arraysub.c: In function `stackused':
arraysub.c:54: error: unrecognizable insn:
(insn 44 22 24 2 arraysub.c:53 (set (reg:SI 1 dx [66])
        (subreg:SI (plus:DI (subreg:DI (reg:SI 7 sp) 0)
	                (const_int -1 [0xffffffffffffffff])) 0)) -1 (nil)
			    (nil))
arraysub.c:54: internal compiler error: in extract_insn, at recog.c:2083

Reported by:	pointyhat via kris
Approved by:	Philip M. Gollucci (maintainer)
@
text
@a47 4
.if ${PERL_LEVEL} < 500600
IGNORE=		requires Perl 5.6.0
.endif

@


1.15
log
@- Update to 1.91
- Unbreak on amd64

PR:		ports/105414
Submitted by:	rafan
Approved by:	maintainer timeout (15 days)
@
text
@d56 4
@


1.14
log
@- Update to 1.89
- refine BROKEN to make portlint happier
- patch to use on Scalar::Util instead of WeakRef
- mark IGNORE under old perl which don't support weak reference

PR:		96656
Submitted by:	leeym
Approved by:	maintainer
@
text
@d9 1
a9 1
PORTVERSION=	1.89
d53 1
a53 1
BROKEN=		Does not compile on amd64 or ia64 (missing -fPIC)
@


1.13
log
@- Change maintainer's email address.
@
text
@d9 1
a9 1
PORTVERSION=	1.83
d18 4
a21 2
BUILD_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/Digest/MD5.pm:${PORTSDIR}/security/p5-Digest-MD5
RUN_DEPENDS=	${BUILD_DEPENDS}
d25 1
d48 4
d53 1
a53 1
BROKEN=		"Does not compile on amd64 or ia64 (missing -fPIC)"
d58 1
a58 1
	  > ${WRKSRC}/ace/wmake/FREEBSD_DEF
@


1.12
log
@BROKEN on amd64 and ia64: Does not compile (missing -fPIC)
@
text
@d15 1
a15 1
MAINTAINER=	philip@@p6m7g8.com
@


1.11
log
@utilize SITE_PERL

PR:		58166
Submitted by:	Cheng-Lung Sung <clsung@@dragon2.net>
@
text
@d43 6
d53 1
a53 1
.include <bsd.port.mk>
@


1.10
log
@- update to 1.83
- give maintainership to submitter as the old maintainer's
  address bounces

PR:		52054
Submitted by:	Philip M. Gollucci <philip@@p6m7g8.com>
Approved by:	maintainer bounces
@
text
@d18 1
a18 1
BUILD_DEPENDS=	${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/Digest/MD5.pm:${PORTSDIR}/security/p5-Digest-MD5
a41 1
MANPREFIX=	${PREFIX}/lib/perl5/${PERL_VERSION}
@


1.9
log
@De-pkg-comment.
@
text
@d9 1
a9 1
PORTVERSION=	1.82
d15 1
a15 1
MAINTAINER=	bio@@freebsd.net
@


1.8
log
@Add dependency on security/p5-Digest-MD5
Noticed on: bento
@
text
@d16 1
@


1.7
log
@CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in
them when using a non-default compiler/linker, so do not use `/' as
delimiter for s///. (I picked `|' instead)
@
text
@d17 3
@


1.6
log
@- Update to version 1.82
@
text
@d41 1
a41 1
	@@ ${SED} -e 's/XX__CC__XX/${CC}/' < ${FILESDIR}/FREEBSD_DEF \
@


1.5
log
@Update to version 1.75
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/p5-AcePerl/Makefile,v 1.4 2001/03/13 14:50:12 kevlo Exp $
d9 1
a9 1
PORTVERSION=	1.75
d19 2
a20 1
MAN3=		Ace.3 Ace::Browser::AceSubs.3 Ace::Graphics::Fk.3 \
d22 5
a26 3
		Ace::Graphics::Glyph::arrow.3 Ace::Graphics::Glyph::dot.3 \
		Ace::Graphics::Glyph::ex.3 Ace::Graphics::Glyph::group.3 \
		Ace::Graphics::Glyph::line.3 Ace::Graphics::Glyph::primers.3 \
d35 3
a37 2
		Ace::Sequence::GappedAlignment.3 Ace::Sequence::Homol.3 \
		Ace::Sequence::Multi.3 Ace::Sequence::Transcript.3
@


1.4
log
@- Upgrade to version 1.70
- Update WWW

PR: 25772
Submitted by: maintainer
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/p5-AcePerl/Makefile,v 1.3 2001/03/01 06:36:48 vanilla Exp $
d9 1
a9 1
PORTVERSION=	1.70
d12 1
a12 1
MASTER_SITE_SUBDIR=Ace
d21 2
a22 1
		Ace::Graphics::Glyph::arrow.3 Ace::Graphics::Glyph::group.3 \
d24 2
a25 1
		Ace::Graphics::Glyph::segments.3 \
d27 1
@


1.3
log
@Remove do-configure section, use PERL_CONFIGURE now.
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/p5-AcePerl/Makefile,v 1.2 2000/10/10 04:03:16 kevlo Exp $
d9 1
a9 1
PORTVERSION=	1.67
d11 1
a11 2
MASTER_SITES=	http://stein.cshl.org/AcePerl/archive/ \
		${MASTER_SITE_PERL_CPAN}
d17 1
a17 12
PERL_CONFIGURE=	YES

MAN3=		Ace::Sequence::Feature.3 \
		Ace::Sequence.3 \
		Ace.3 \
		Ace::Sequence::FeatureList.3 \
		Ace::Sequence::Multi.3 \
		Ace::Sequence::Homol.3 \
		Ace::Object.3 \
		Ace::Local.3 \
		Ace::Iterator.3 \
		Ace::Model.3
d19 12
@


1.2
log
@- Update biology/p5-AcePerl from 1.62 to 1.67
- Alphabetise ${PLIST} to ease future maintenance
- Port now compiles in XS optimisations and RPC server interface
- Port now honours ${CC} properly, also for compiled extensions
- Port now uses PERL_CONFIGURE
- Hand over port MAINTAINERship to FreeBSD bio-porters mailing list

PR: 21865
Submitted by: MAINTAINER
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/p5-AcePerl/Makefile,v 1.1 2000/07/28 13:16:10 nbm Exp $
a17 1
USE_PERL5=	YES
@


1.1
log
@Add p5-AcePerl, a perl interface to the ACEDB genome database system

PR:		ports/20223
Submitted by:	Johann Visagie <johann@@egenetics.com>
@
text
@d5 1
a5 1
# $FreeBSD$
d9 1
a9 1
PORTVERSION=	1.62
d16 1
a16 1
MAINTAINER=	johann@@egenetics.com
d19 1
d34 3
a36 3
do-configure:
	${CP} ${FILESDIR}/FREEBSD_DEF ${WRKSRC}/ace/wmake/
	@@ cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} ${PERL5} Makefile.PL
@

