head	1.30;
access;
symbols
	RELEASE_8_3_0:1.26
	RELEASE_9_0_0:1.24
	RELEASE_7_4_0:1.24
	RELEASE_8_2_0:1.24
	RELEASE_6_EOL:1.24
	RELEASE_8_1_0:1.23
	RELEASE_7_3_0:1.19
	RELEASE_8_0_0:1.18
	RELEASE_7_2_0:1.13
	RELEASE_7_1_0:1.12
	RELEASE_6_4_0:1.12
	RELEASE_5_EOL:1.12
	RELEASE_7_0_0:1.7
	RELEASE_6_3_0:1.7
	PRE_XORG_7:1.5
	RELEASE_4_EOL:1.4
	RELEASE_6_2_0:1.2
	RELEASE_6_1_0:1.2
	RELEASE_5_5_0:1.2;
locks; strict;
comment	@# @;


1.30
date	2012.12.17.15.43.17;	author svnexp;	state Exp;
branches;
next	1.29;

1.29
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.28;

1.28
date	2012.06.10.18.41.15;	author swills;	state Exp;
branches;
next	1.27;

1.27
date	2012.06.01.05.16.28;	author dinoex;	state Exp;
branches;
next	1.26;

1.26
date	2012.03.13.16.14.41;	author pgollucci;	state Exp;
branches;
next	1.25;

1.25
date	2012.03.08.18.44.43;	author pgollucci;	state Exp;
branches;
next	1.24;

1.24
date	2010.09.21.07.56.34;	author mm;	state Exp;
branches;
next	1.23;

1.23
date	2010.06.30.07.36.25;	author wen;	state Exp;
branches;
next	1.22;

1.22
date	2010.06.24.00.24.22;	author wen;	state Exp;
branches;
next	1.21;

1.21
date	2010.06.12.06.18.36;	author wen;	state Exp;
branches;
next	1.20;

1.20
date	2010.03.28.06.31.37;	author dinoex;	state Exp;
branches;
next	1.19;

1.19
date	2010.02.05.11.34.37;	author dinoex;	state Exp;
branches;
next	1.18;

1.18
date	2009.09.08.12.08.12;	author jadawin;	state Exp;
branches;
next	1.17;

1.17
date	2009.08.27.20.34.58;	author miwi;	state Exp;
branches;
next	1.16;

1.16
date	2009.07.31.13.49.18;	author dinoex;	state Exp;
branches;
next	1.15;

1.15
date	2009.07.22.16.26.23;	author pgollucci;	state Exp;
branches;
next	1.14;

1.14
date	2009.06.08.09.30.07;	author jadawin;	state Exp;
branches;
next	1.13;

1.13
date	2008.12.11.05.19.12;	author leeym;	state Exp;
branches;
next	1.12;

1.12
date	2008.05.31.13.46.14;	author miwi;	state Exp;
branches;
next	1.11;

1.11
date	2008.05.23.12.22.21;	author mat;	state Exp;
branches;
next	1.10;

1.10
date	2008.05.19.13.11.54;	author araujo;	state Exp;
branches;
next	1.9;

1.9
date	2008.04.17.14.24.11;	author araujo;	state Exp;
branches;
next	1.8;

1.8
date	2008.03.12.12.24.10;	author miwi;	state Exp;
branches;
next	1.7;

1.7
date	2007.09.07.14.45.12;	author miwi;	state Exp;
branches;
next	1.6;

1.6
date	2007.05.19.20.00.24;	author flz;	state Exp;
branches;
next	1.5;

1.5
date	2007.03.14.08.18.21;	author linimon;	state Exp;
branches;
next	1.4;

1.4
date	2006.12.19.06.47.45;	author rafan;	state Exp;
branches;
next	1.3;

1.3
date	2006.12.03.12.45.56;	author demon;	state Exp;
branches;
next	1.2;

1.2
date	2005.11.26.03.40.59;	author fenner;	state Exp;
branches;
next	1.1;

1.1
date	2005.09.01.13.09.32;	author garga;	state Exp;
branches;
next	;


desc
@@


1.30
log
@## SVN ## Exported commit - http://svnweb.freebsd.org/changeset/base/309105
## SVN ## CVS IS DEPRECATED: http://wiki.freebsd.org/CvsIsDeprecated
## SVN ##
## SVN ## ------------------------------------------------------------------------
## SVN ## r309105 | az | 2012-12-17 15:39:36 +0000 (Mon, 17 Dec 2012) | 3 lines
## SVN ##
## SVN ## Cleanup supporting perl version 5.8 and 5.10,
## SVN ## lang/perl5.8 and lang/5.10 will be removed from ports tree soon.
## SVN ##
## SVN ## ------------------------------------------------------------------------
## SVN ##
@
text
@# New ports collection makefile for:	p5-Bio-Das
# Date created:				17 January 2005
# Whom:					Razi Khaja <razi@@genet.sickkids.on.ca>
#
# $FreeBSD: head/biology/p5-Bio-Das/Makefile 309105 2012-12-17 15:39:36Z az $
#

PORTNAME=	Bio-Das
PORTVERSION=	1.17
PORTREVISION=	2
CATEGORIES=	biology perl5
MASTER_SITES=	CPAN
PKGNAMEPREFIX=	p5-

MAINTAINER=	perl@@FreeBSD.org
COMMENT=	Client-side library for Distributed Genome Annotation System

RUN_DEPENDS=	p5-HTML-Parser>=3:${PORTSDIR}/www/p5-HTML-Parser \
		p5-bioperl>=0:${PORTSDIR}/biology/p5-bioperl \
		p5-libwww>=5:${PORTSDIR}/www/p5-libwww
BUILD_DEPENDS:=	${RUN_DEPENDS}

PERL_CONFIGURE=	YES

MAN3=	Bio::Das.3 Bio::Das::AGPServer::Config.3 Bio::Das::AGPServer::Daemon.3 \
	Bio::Das::AGPServer::Parser.3 Bio::Das::AGPServer::SQLStorage.3 \
	Bio::Das::AGPServer::SQLStorage::CSV::DB.3 \
	Bio::Das::AGPServer::SQLStorage::MySQL::DB.3 \
	Bio::Das::DSN.3 Bio::Das::Feature.3 Bio::Das::FeatureIterator.3 \
	Bio::Das::HTTP::Fetch.3 Bio::Das::Map.3 Bio::Das::Request.3 \
	Bio::Das::Request::Dnas.3 Bio::Das::Request::Dsn.3 \
	Bio::Das::Request::Entry_points.3 Bio::Das::Request::Feature2Segments.3 \
	Bio::Das::Request::Sequences.3 Bio::Das::Request::Stylesheet.3 \
	Bio::Das::Request::Types.3 Bio::Das::Segment.3 Bio::Das::Stylesheet.3 \
	Bio::Das::Type.3 Bio::Das::TypeHandler.3 Bio::Das::Util.3

.include <bsd.port.mk>
@


1.29
log
@Switch exporter over
@
text
@d5 1
a5 1
# $FreeBSD: head/biology/p5-Bio-Das/Makefile 300895 2012-07-14 12:56:14Z beat $
d37 1
a37 7
.include <bsd.port.pre.mk>

.if ${PERL_LEVEL} < 500903
RUN_DEPENDS+=	p5-IO-Compress>=2.017:${PORTSDIR}/archivers/p5-IO-Compress
.endif

.include <bsd.port.post.mk>
@


1.28
log
@- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or
  RUN_DEPENDS=${BUILD_DEPENDS} to use := which portlint has warned
  about for a while.

PR:		ports/168208
Approved by:	portmgr (miwi)
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.27
log
@- update png to 1.5.10
@
text
@d21 1
a21 1
BUILD_DEPENDS=	${RUN_DEPENDS}
@


1.26
log
@- Revert ports/165605 as requested by portmgr@@

Note: devel/p5-B-Size and devel/p5-Devel-Arena
where intentionally not restored.

PR:             ports/165605
Approved by:    portmgr (bapt)
Feature safe:   yes (I sure hope so)
@
text
@d10 1
a10 1
PORTREVISION=	1
@


1.25
log
@- Remove ports that only work with < perl 5.12 (devel/p5-B-Size, devel/p5-Devel-Arena)
- Remove conditionals for PERL_LEVEL < 501200
- Remove regression-test targets b/c this will be centralized in Mk/bsd.perl.mk
- Other minor cleanups
  RUN_DEPENDS = ${BUILD_DEPENDS} -> RUN_DEPENDS:= ${BUILD_DEPENDS}

PR:             ports/165605
Submitted by:   pgollucci (myself)
Approved by:    portmgr (linimon)
Exp Run by:     linimon
Tested by:      make index
@
text
@d37 7
a43 1
.include <bsd.port.mk>
@


1.24
log
@Change dependency on old p5-Compress-Zlib, p5-IO-Compress-Base,
p5-IO-Compress-Zlib and p5-IO-Compress-Bzip2 modules to p5-IO-Compress.
Explicitly depend on p5-IO-Compress only if PERL_LEVEL < 500903
Bump PORTREVISION
@
text
@d37 1
a37 7
.include <bsd.port.pre.mk>

.if ${PERL_LEVEL} < 500903
RUN_DEPENDS+=	p5-IO-Compress>=2.017:${PORTSDIR}/archivers/p5-IO-Compress
.endif

.include <bsd.port.post.mk>
@


1.23
log
@- Update to 1.17

Feature safe:	yes
@
text
@d10 1
d40 1
a40 1
RUN_DEPENDS+=	p5-Compress-Zlib>=1:${PORTSDIR}/archivers/p5-Compress-Zlib
@


1.22
log
@- Update to 1.16

Feature safe:	yes
@
text
@d9 1
a9 1
PORTVERSION=	1.16
@


1.21
log
@- Update to 1.15
@
text
@d9 1
a9 1
PORTVERSION=	1.15
@


1.20
log
@- update to 1.4.1
Reviewed by:	exp8 run on pointyhat
Supported by:	miwi
@
text
@d9 1
a9 2
PORTVERSION=	1.14
PORTREVISION=	2
@


1.19
log
@- update to jpeg-8
@
text
@d10 1
a10 1
PORTREVISION=	1
@


1.18
log
@- Update to 1.14
@
text
@d10 1
@


1.17
log
@- Update to 1.12

PR:		138230
Submitted by:	Wen Heping <wenheping@@gmail.com>
@
text
@d9 1
a9 1
PORTVERSION=	1.12
@


1.16
log
@- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
Requested by:	edwin
@
text
@d9 1
a9 2
PORTVERSION=	1.11
PORTREVISION=	1
@


1.15
log
@- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks

PR:             ports/135398
Tested by:      2 -exp runs by pav
Approved by:    portmgr (pav)
@
text
@d10 1
@


1.14
log
@- Update to 1.11
@
text
@a41 4
.if ${PERL_LEVEL} < 500703
RUN_DEPENDS+=	p5-MIME-Base64>=2.12:${PORTSDIR}/converters/p5-MIME-Base64
.endif

@


1.13
log
@- update to 1.10
@
text
@d9 1
a9 1
PORTVERSION=	1.10
@


1.12
log
@- Update to 1.09
@
text
@d9 1
a9 1
PORTVERSION=	1.09
d11 1
a11 2
MASTER_SITES=	http://www.biodas.org/download/Bio::Das/ \
		CPAN
d17 4
a20 6
BUILD_DEPENDS=	${SITE_PERL}/Compress/Zlib.pm:${PORTSDIR}/archivers/p5-Compress-Zlib \
		${SITE_PERL}/${PERL_ARCH}/HTML/Parser.pm:${PORTSDIR}/www/p5-HTML-Parser \
		${SITE_PERL}/LWP/UserAgent.pm:${PORTSDIR}/www/p5-libwww \
		${SITE_PERL}/${PERL_ARCH}/MIME/Base64.pm:${PORTSDIR}/converters/p5-MIME-Base64 \
		${SITE_PERL}/Bio/Root/Root.pm:${PORTSDIR}/biology/p5-bioperl
RUN_DEPENDS=	${BUILD_DEPENDS}
d36 11
a46 1
.include <bsd.port.mk>
@


1.11
log
@Update to 1.08
@
text
@d9 1
a9 1
PORTVERSION=	1.08
@


1.10
log
@- Include some ports in perl5 category.

PR:		ports/123530
Submitted by:	Philip M. Gollucci <pgollucci@@p6m7g8.com>
Reworked by:	araujo (myself)
Approved by:	flz (portmgr)
@
text
@d9 1
a9 1
PORTVERSION=	1.07
@


1.9
log
@- Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN.

PR:		ports/122674
Submitted by:	Philip M. Gollucci <pgollucci@@p6m7g8.com>
Reworked by:	araujo (myself)
Approved by:	portmgr (pav)
@
text
@d10 1
a10 1
CATEGORIES=	biology
@


1.8
log
@- Update to 1.07
@
text
@d12 1
a12 2
		${MASTER_SITE_PERL_CPAN}
MASTER_SITE_SUBDIR=	Bio
@


1.7
log
@- Update to 1.06
- Remove 4.X cruft
@
text
@d9 1
a9 1
PORTVERSION=	1.06
@


1.6
log
@- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
@
text
@d9 1
a9 2
PORTVERSION=	1.03
PORTREVISION=	1
d40 1
a40 7
.include <bsd.port.pre.mk>

.if (${PERL_LEVEL} < 500601)
BROKEN=	Some dependencies requires at least 5.6.1  Please install lang/perl5.8 and try again
.endif

.include <bsd.port.post.mk>
@


1.5
log
@Reset razi@@genet.sickkids.on.ca due to maintainer-timeouts and no response to
email.

Hat:		portmgr
@
text
@d10 1
@


1.4
log
@- Update to 1.03

PR:		ports/106300
Submitted by:	chinsan
Approved by:	maintainer timeout (15 days)
@
text
@d16 1
a16 1
MAINTAINER=	razi@@genet.sickkids.on.ca
@


1.3
log
@Correct path to Compress::Zlib.pm after recent p5-Compress-Zlib update.
@
text
@d9 1
a9 1
PORTVERSION=	1.02
d28 2
a29 5
MAN3=	Bio::Das.3 \
	Bio::Das::AGPServer::Config.3 \
	Bio::Das::AGPServer::Daemon.3 \
	Bio::Das::AGPServer::Parser.3 \
	Bio::Das::AGPServer::SQLStorage.3 \
d32 7
a38 39
	Bio::Das::DSN.3 \
	Bio::Das::Feature.3 \
	Bio::Das::FeatureIterator.3 \
	Bio::Das::HTTP::Fetch.3 \
	Bio::Das::Map.3 \
	Bio::Das::ProServer::Config.3 \
	Bio::Das::ProServer::Daemon.3 \
	Bio::Das::ProServer::Loader::agp.3 \
	Bio::Das::ProServer::SourceAdaptor.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::dbi.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::file.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::generic.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::getz.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::getzc.3 \
	Bio::Das::ProServer::SourceAdaptor::Transport::oracle.3 \
	Bio::Das::ProServer::SourceAdaptor::agp.3 \
	Bio::Das::ProServer::SourceAdaptor::cosmic.3 \
	Bio::Das::ProServer::SourceAdaptor::gensat.3 \
	Bio::Das::ProServer::SourceAdaptor::haplotype.3 \
	Bio::Das::ProServer::SourceAdaptor::image.3 \
	Bio::Das::ProServer::SourceAdaptor::interpro.3 \
	Bio::Das::ProServer::SourceAdaptor::simple.3 \
	Bio::Das::ProServer::SourceAdaptor::snp.3 \
	Bio::Das::ProServer::SourceAdaptor::sts.3 \
	Bio::Das::ProServer::SourceAdaptor::swissprot.3 \
	Bio::Das::ProServer::SourceAdaptor::trace.3 \
	Bio::Das::Request.3 \
	Bio::Das::Request::Dnas.3 \
	Bio::Das::Request::Dsn.3 \
	Bio::Das::Request::Entry_points.3 \
	Bio::Das::Request::Feature2Segments.3 \
	Bio::Das::Request::Sequences.3 \
	Bio::Das::Request::Stylesheet.3 \
	Bio::Das::Request::Types.3 \
	Bio::Das::Segment.3 \
	Bio::Das::Stylesheet.3 \
	Bio::Das::Type.3 \
	Bio::Das::TypeHandler.3 \
	Bio::Das::Util.3
d43 1
a43 1
BROKEN=	"Some dependencies doesn't work with Perl < 5.6.1"
@


1.2
log
@Add the right MASTER_SITE_SUBDIR, so that this port is fetchable from
 20 sites instead of just 1.
@
text
@d19 1
a19 1
BUILD_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/Compress/Zlib.pm:${PORTSDIR}/archivers/p5-Compress-Zlib \
@


1.1
log
@Add p5-Bio-Das 1.02, client-side library for Distributed Genome
Annotation System.

PR:		ports/76379
Submitted by:	Razi Khaja <razi@@genet.sickkids.on.ca>
@
text
@d13 1
@

