head	1.8;
access;
symbols
	RELEASE_8_3_0:1.7
	RELEASE_9_0_0:1.4
	RELEASE_7_4_0:1.4
	RELEASE_8_2_0:1.4
	RELEASE_6_EOL:1.3
	RELEASE_8_1_0:1.1
	RELEASE_7_3_0:1.1
	RELEASE_8_0_0:1.1;
locks; strict;
comment	@# @;


1.8
date	2012.11.17.05.54.52;	author svnexp;	state Exp;
branches;
next	1.7;

1.7
date	2012.02.11.02.04.41;	author sunpoet;	state Exp;
branches;
next	1.6;

1.6
date	2012.02.09.01.23.59;	author wen;	state Exp;
branches;
next	1.5;

1.5
date	2012.01.21.17.37.23;	author eadler;	state Exp;
branches;
next	1.4;

1.4
date	2010.12.25.16.55.26;	author sunpoet;	state Exp;
branches;
next	1.3;

1.3
date	2010.09.25.08.14.02;	author wen;	state Exp;
branches;
next	1.2;

1.2
date	2010.09.07.07.15.24;	author wen;	state Exp;
branches;
next	1.1;

1.1
date	2009.08.22.20.39.51;	author miwi;	state Exp;
branches;
next	;


desc
@@


1.8
log
@Switch exporter over
@
text
@# New ports collection makefile for:	Bio-NEXUS
# Date created:				20 Sug, 2009
# Whom:					Wen Heping <wenheping@@gmail.com>
#
# $FreeBSD: head/biology/p5-Bio-NEXUS/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	Bio-NEXUS
PORTVERSION=	0.78
CATEGORIES=	biology perl5
MASTER_SITES=	CPAN
PKGNAMEPREFIX=	p5-

MAINTAINER=	perl@@FreeBSD.org
COMMENT=	An object-oriented Perl API for the NEXUS file format

BUILD_DEPENDS=	p5-Clone-PP>=1.02:${PORTSDIR}/devel/p5-Clone-PP
RUN_DEPENDS:=	${BUILD_DEPENDS}

TEST_DEPENDS=	p5-Test-Deep>=0.106:${PORTSDIR}/devel/p5-Test-Deep \
		p5-Test-Pod>=0:${PORTSDIR}/devel/p5-Test-Pod \
		p5-Test-Pod-Coverage>=0:${PORTSDIR}/devel/p5-Test-Pod-Coverage

PERL_CONFIGURE=	yes

MAN1=		nex2text_tree.pl.1 \
		nexplot.pl.1 \
		nextool.pl.1
MAN3=		Bio::NEXUS.3 \
		Bio::NEXUS::AssumptionsBlock.3 \
		Bio::NEXUS::Block.3 \
		Bio::NEXUS::CharactersBlock.3 \
		Bio::NEXUS::CodonsBlock.3 \
		Bio::NEXUS::DataBlock.3 \
		Bio::NEXUS::DistancesBlock.3 \
		Bio::NEXUS::Functions.3 \
		Bio::NEXUS::HistoryBlock.3 \
		Bio::NEXUS::Matrix.3 \
		Bio::NEXUS::NHXCmd.3 \
		Bio::NEXUS::Node.3 \
		Bio::NEXUS::NotesBlock.3 \
		Bio::NEXUS::SetsBlock.3 \
		Bio::NEXUS::SpanBlock.3 \
		Bio::NEXUS::TaxUnit.3 \
		Bio::NEXUS::TaxUnitSet.3 \
		Bio::NEXUS::TaxaBlock.3 \
		Bio::NEXUS::Tools::GraphicsParams.3 \
		Bio::NEXUS::Tools::NexModifier.3 \
		Bio::NEXUS::Tools::NexPlotter.3 \
		Bio::NEXUS::Tree.3 \
		Bio::NEXUS::TreesBlock.3 \
		Bio::NEXUS::UnalignedBlock.3 \
		Bio::NEXUS::UnknownBlock.3 \
		Bio::NEXUS::Util::Exceptions.3 \
		Bio::NEXUS::Util::Logger.3 \
		Bio::NEXUS::WeightSet.3

.include <bsd.port.mk>
@


1.7
log
@- Update to 0.78
- Sort TEST_DEPENDS, MAN1, MAN3 and PLIST

Changes:	http://search.cpan.org/dist/Bio-NEXUS/doc/changes.txt
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.6
log
@- Update to 0.77
@
text
@d9 1
a9 1
PORTVERSION=	0.77
d19 4
a22 3
TEST_DEPENDS=	p5-Test-Pod>=0:${PORTSDIR}/devel/p5-Test-Pod \
		p5-Test-Pod-Coverage>=0:${PORTSDIR}/devel/p5-Test-Pod-Coverage \
		p5-Test-Deep>=0.106:${PORTSDIR}/devel/p5-Test-Deep
d26 21
a46 13
MAN1=		nextool.pl.1 nex2text_tree.pl.1 nexplot.pl.1
MAN3=		Bio::NEXUS::DataBlock.3 Bio::NEXUS::CodonsBlock.3 \
		Bio::NEXUS::NotesBlock.3 Bio::NEXUS::NHXCmd.3 \
		Bio::NEXUS::HistoryBlock.3 Bio::NEXUS::TaxUnit.3 \
		Bio::NEXUS::CharactersBlock.3 Bio::NEXUS::SpanBlock.3 \
		Bio::NEXUS::UnalignedBlock.3 Bio::NEXUS::TaxUnitSet.3 \
		Bio::NEXUS::DistancesBlock.3 Bio::NEXUS::UnknownBlock.3 \
		Bio::NEXUS::Node.3 Bio::NEXUS::Matrix.3 \
		Bio::NEXUS::Tree.3 Bio::NEXUS::WeightSet.3 \
		Bio::NEXUS::TreesBlock.3 Bio::NEXUS::Util::Exceptions.3 \
		Bio::NEXUS::SetsBlock.3 Bio::NEXUS::TaxaBlock.3 \
		Bio::NEXUS::Util::Logger.3 Bio::NEXUS::AssumptionsBlock.3 \
		Bio::NEXUS::Block.3 Bio::NEXUS::Functions.3 \
d50 7
a56 1
		Bio::NEXUS.3
@


1.5
log
@At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:	portmgr
@
text
@d9 1
a9 1
PORTVERSION=	0.76
d17 4
a20 1
BUILD_DEPENDS=	p5-Clone-PP>=1.02:${PORTSDIR}/devel/p5-Clone-PP \
a21 1
RUN_DEPENDS:=	${BUILD_DEPENDS}
@


1.4
log
@- Use canonical format for FreeBSD.org MAINTAINER addresses
- Remove obsolete MD5 checksum while I'm here

PR:		ports/152844
Submitted by:	sunpoet (myself)
Approved by:	miwi (with portmgr hat)
@
text
@d19 1
a19 1
RUN_DEPENDS=	${BUILD_DEPENDS}
@


1.3
log
@- Update to 0.76
@
text
@d14 1
a14 1
MAINTAINER=	perl@@freebsd.org
@


1.2
log
@- Update to 0.75
- Reset maintainer to perl@@
@
text
@d9 1
a9 1
PORTVERSION=	0.75
@


1.1
log
@Bio::NEXUS package provides an object-oriented, Perl-based
applications programming interface (API) to the NEXUS file
format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
NEXUS is a powerful and extensible format designed for use
in evolutionary analysis, including the analysis of molecular
sequence data as well as classical morphological and life-history
data. NEXUS is the input or output format for software such as
PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
so on.  This package also contains the demonstration applications
nexplot.pl (plot character data with a tree) and nextool.pl
(allowing programmatic editing, e.g., selecting particular
clades or subsets of data).

WWW: http://search.cpan.org/dist/Bio-NEXUS/

PR:		ports/137983
Submitted by:	Wen Heping <wenheping at gmail.com>
@
text
@d9 1
a9 1
PORTVERSION=	0.72
d14 1
a14 1
MAINTAINER=	wenheping@@gmail.com
d36 3
@

