head	1.6;
access;
symbols
	RELEASE_4_9_0:1.5
	RELEASE_5_1_0:1.5
	RELEASE_4_8_0:1.4
	RELEASE_5_0_0:1.4
	RELEASE_4_7_0:1.3
	RELEASE_4_6_2:1.3
	RELEASE_4_6_1:1.3
	RELEASE_4_6_0:1.3
	RELEASE_5_0_DP1:1.3
	RELEASE_4_5_0:1.3
	RELEASE_4_4_0:1.3
	RELEASE_4_3_0:1.3
	RELEASE_4_2_0:1.3
	RELEASE_4_1_1:1.3
	RELEASE_4_1_0:1.3
	RELEASE_3_5_0:1.3
	RELEASE_4_0_0:1.3
	RELEASE_3_4_0:1.3
	RELEASE_3_3_0:1.3
	RELEASE_3_2_0:1.2
	RELEASE_3_1_0:1.2
	RELEASE_2_2_8:1.2
	RELEASE_3_0_0:1.2
	RELEASE_2_2_7:1.1.1.1
	RELEASE_2_2_6:1.1.1.1
	seaview_1_0:1.1.1.1
	FRANKCH:1.1.1;
locks; strict;
comment	@# @;


1.6
date	2003.11.17.13.36.41;	author krion;	state dead;
branches;
next	1.5;

1.5
date	2003.05.22.05.59.32;	author hoek;	state Exp;
branches;
next	1.4;

1.4
date	2002.11.20.14.03.25;	author ijliao;	state Exp;
branches;
next	1.3;

1.3
date	99.08.31.03.57.56;	author cpiazza;	state Exp;
branches;
next	1.2;

1.2
date	98.08.21.03.09.08;	author jseger;	state Exp;
branches;
next	1.1;

1.1
date	97.12.21.22.04.39;	author vanilla;	state Exp;
branches
	1.1.1.1;
next	;

1.1.1.1
date	97.12.21.22.04.39;	author vanilla;	state Exp;
branches;
next	;


desc
@@


1.6
log
@- Update to new version 2003.11.17
- Unbreak this port
@
text
@
$FreeBSD: ports/biology/seaview/files/patch-aa,v 1.5 2003/05/22 05:59:32 hoek Exp $

--- makefile.orig	Thu Nov 21 10:48:08 2002
+++ makefile	Thu May 22 01:12:43 2003
@@@@ -1,16 +1,16 @@@@
-FLTK = ../fltk-1.1.0
-
 OBJECTS = seaview.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o chooser_plus.o resource.o nexus.o old_file_chooser.o
 
-CFLAGS  = -c $(OPT) -I$(FLTK) $(DEBUG)
+CFLAGS+= -I $(PREFIX)/include -L $(PREFIX)/lib
 
-CXX = CC
+CXX = g++
+
+all: seaview
 
 seaview : $(OBJECTS) 
-	$(CXX) $(DEBUG) -o $@@ $(OBJECTS) -L$(FLTK)/lib -lfltk -lX11 -lm
+	$(CXX) $(CFLAGS) -o $@@ $(OBJECTS) -lfltk -lX11 -lMesaGL -lXext -lm
 
 
 .SUFFIXES:	.cxx .h .o
 
 .cxx.o :
-	$(CXX) $(CFLAGS) $<
+	$(CXX) -c $(CFLAGS) $<
@


1.5
log
@Upgrade to 2003.01.21.  Appears to only add some more file export/print
options.  Additional patches were necessary since the fltk port seems
to have been upgraded and thus also broken this port (which would
been already broken due to the checksum failure).
@
text
@d2 1
a2 1
$FreeBSD$
@


1.4
log
@unbroke by upgrade to 20021018
drop maintainership

PR:		45466
Submitted by:	old maintainer
@
text
@d1 6
a6 3
--- makefile.orig	Wed Sep 25 23:58:15 2002
+++ makefile	Mon Nov 18 11:26:42 2002
@@@@ -1,13 +1,15 @@@@
d8 2
a9 1
+OPT = -O2
d11 2
a12 5
-OBJECTS = seaview.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o chooser_plus.o resource.o nexus.o old_file_chooser.o
+OBJECTS = seaview.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o chooser_plus.o resource.o nexus.o
 
-CFLAGS  = -c $(OPT) -I$(FLTK)
+CFLAGS  = -c $(OPT) -I$(PREFIX)/include
d20 2
a21 2
-	$(CXX) -o $@@ $(OBJECTS) -L$(FLTK)/lib -lfltk -lX11 -lm
+	$(CXX) -o $@@ $(OBJECTS) -L$(PREFIX)/lib -lfltk -lX11 -lMesaGL -lXext -lm
d25 4
@


1.3
log
@Distfile changed on the MASTER_SITE.  I have no idea if this
was functional or not, as there isn't a version number anywhere.
Support CC in patch-aa, too...
@
text
@d1 14
a14 10
--- Makefile.orig	Mon Aug 30 20:54:56 1999
+++ Makefile	Mon Aug 30 20:55:48 1999
@@@@ -0,0 +1,17 @@@@
+#matpt.h
+#seaview.h
+CC	?= gcc
+CFLAGS+= -I${X11BASE}/include
+LIBS	= -L${X11BASE}/lib -lxforms -lX11 -lm
+SRCS	= align.c comlines.c load_seq.c regions.c seaview.c use_mase_files.c xfmatpt.c
+OBJS	= align.o comlines.o load_seq.o regions.o seaview.o use_mase_files.o xfmatpt.o
d17 7
a23 8
+
+seaview: $(OBJS)
+	$(CC) -o seaview $(OBJS) $(LIBS)
+
+c.o.: $(SRCS)
+	$(CC) $(CFLAGS) -c $(SRCS)
+
+
@


1.2
log
@Unbreak by making a new checksum and fixing the makefile to find a new source
file.
@
text
@d1 2
a2 2
--- Makefile.orig	Fri Dec  5 13:22:24 1997
+++ Makefile	Fri Dec  5 13:20:45 1997
d6 3
a8 3
+CC	= gcc
+CFLAGS+= -I/usr/X11R6/include
+LIBS	= -L/usr/X11R6/lib -lxforms -lX11 -lm
@


1.1
log
@Initial revision
@
text
@d9 2
a10 2
+SRCS	= align.c load_seq.c regions.c seaview.c use_mase_files.c xfmatpt.c
+OBJS	= align.o load_seq.o regions.o seaview.o use_mase_files.o xfmatpt.o
@


1.1.1.1
log
@Seaview is a multiple DNA sequence alignment editor.
It is capable of align DNA sequences from various organisms
and assign their position in the phylogenic tree.
PR:		ports/5229
Submitted by:	Frank Chen Hsiung Chan <frankch@@waru.life.nthu.edu.tw>
@
text
@@
