head	1.13;
access;
symbols
	RELEASE_8_3_0:1.12
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	RELEASE_4_1_1:1.2;
locks; strict;
comment	@# @;


1.13
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date	2000.07.27.14.33.00;	author nbm;	state Exp;
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desc
@@


1.13
log
@Switch exporter over
@
text
@# New ports collection makefile for:	sim4
# Date created:		27 July 2000
# Whom:	      		Johann Visagie <johann@@egenetics.com>
#
# $FreeBSD: head/biology/sim4/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	sim4
PORTVERSION=	2003.09.21
CATEGORIES=	biology
MASTER_SITES=	http://globin.cse.psu.edu/ftp/dist/sim4/
DISTNAME=	${PORTNAME}.${PORTVERSION:S/./-/g}

MAINTAINER=	ports@@FreeBSD.org
COMMENT=	An algorithm for aligning expressed DNA with genomic sequences

WRKSRC=		${WRKDIR}/sim4.${PORTVERSION:S/./-/g}

ALL_TARGET=	sim4
PLIST_FILES=	bin/sim4

post-patch:
	${REINPLACE_CMD} -e 's|^CC=|CC?=|g ; \
		s|^CFLAGS=|CFLAGS+=|g' ${WRKSRC}/Makefile

do-install:
	@@ ${INSTALL_PROGRAM} ${WRKSRC}/sim4 ${PREFIX}/bin

.include <bsd.port.mk>
@


1.12
log
@Remove USE_REINPLACE from all categories starting with B
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.11
log
@- Update to version 2003.09.21

PR:		ports/64160
Submitted by:	Liam J. Foy <liamfoy@@sepulcrum.org>
@
text
@a18 2
USE_REINPLACE=	yes

@


1.10
log
@Use PLIST_FILES.

Reviewed by:	marcus
@
text
@d9 1
a9 1
PORTVERSION=	2002.03.03
d19 2
d23 4
@


1.9
log
@ports with possibly unreachable MAINTAINERs
*** addresses that seem to be dead:

PR:		ports/58694
Submitted by:	Oliver Eikemeier <eikemeier@@fillmore-labs.com>
@
text
@d20 1
@


1.8
log
@De-pkg-comment.
@
text
@d14 1
a14 1
MAINTAINER=	bio@@freebsd.net
@


1.7
log
@Update to sim4-2002.03.03 to unbreak build.

Noticed by:	bento
@
text
@d15 1
@


1.6
log
@- Update to version of 2001-12-30
@
text
@d9 1
a9 1
PORTVERSION=	2001.12.30
d12 1
a12 1
DISTNAME=	sim4
@


1.5
log
@Update to version 2001.10.12.
@
text
@d9 1
a9 1
PORTVERSION=	2001.10.12
@


1.4
log
@Update to version 2001-02-06

PR:		25200
Submitted by:	Johann Visagie <johann@@egenetics.com>
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/sim4/Makefile,v 1.3 2000/10/26 10:19:07 jeh Exp $
d9 1
a9 1
PORTVERSION=	2001.02.06
@


1.3
log
@Update biology/sim4 to 2000.10.19
Maintainership over to FreeBSD bio-porters mailing list

PR:		22306
Submitted by:	Johann Visagie <johann@@egenetics.com> MAINTAINER
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/sim4/Makefile,v 1.2 2000/09/04 02:43:57 kevlo Exp $
d9 1
a9 1
PORTVERSION=	2000.10.19
@


1.2
log
@Update to version 2000.08.24

PR: 20897
Submitted by: MAINTAINER
@
text
@d5 1
a5 1
# $FreeBSD: ports/biology/sim4/Makefile,v 1.1 2000/07/27 14:33:00 nbm Exp $
d9 1
a9 1
PORTVERSION=	2000.08.24
d14 1
a14 1
MAINTAINER=	johann@@egenetics.com
d16 1
a16 1
WRKSRC=		${WRKDIR}/sim4.2000-08-24
@


1.1
log
@Add sim4, an implementation of the sim4 algorithm for aligning expressed
DNA with genomic sequences

PR:		ports/20219
Submitted by:	Johann Visagie <johann@@egenetics.com>
@
text
@d5 1
a5 1
# $FreeBSD$
d9 1
a9 1
PORTVERSION=	2000.07.13
d16 1
a16 1
WRKSRC=		${WRKDIR}/sim4.2000-07-13
@

