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access;
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locks; strict;
comment	@# @;


1.8
date	2012.11.17.05.54.53;	author svnexp;	state Exp;
branches;
next	1.7;

1.7
date	2008.08.21.06.16.21;	author rafan;	state Exp;
branches;
next	1.6;

1.6
date	2005.04.12.03.24.57;	author obrien;	state Exp;
branches;
next	1.5;

1.5
date	2005.04.11.08.01.30;	author obrien;	state Exp;
branches;
next	1.4;

1.4
date	2004.07.30.22.02.00;	author pav;	state Exp;
branches;
next	1.3;

1.3
date	2004.02.06.13.10.56;	author trevor;	state Exp;
branches;
next	1.2;

1.2
date	2003.02.21.11.01.37;	author knu;	state Exp;
branches;
next	1.1;

1.1
date	2002.11.20.08.54.10;	author ijliao;	state Exp;
branches;
next	;


desc
@@


1.8
log
@Switch exporter over
@
text
@# Ports collection makefile for:	treepuzzle
# Date created:				26 August 2002
# Whom:					lentferj
#
# $FreeBSD: head/biology/treepuzzle/Makefile 300895 2012-07-14 12:56:14Z beat $
#

PORTNAME=	treepuzzle
PORTVERSION=	5.2
CATEGORIES=	biology
MASTER_SITES=	http://www.tree-puzzle.de/
DISTNAME=	tree-puzzle-${PORTVERSION}

MAINTAINER=	jan.lentfer@@web.de
COMMENT=	Maximum likelihood phylogeny reconstruction using quartets

GNU_CONFIGURE=	yes
PLIST_FILES=	bin/puzzle

pre-configure:
	@@${ECHO_MSG} "---------------------------------------------"
	@@${ECHO_MSG} ""
	@@${ECHO_MSG} "If you want to install the parallel version of tree-puzzle, you need to install"
	@@${ECHO_MSG} "from the ports and have to have a MPI-Implementation on your system."
	@@${ECHO_MSG} "The tree-puzzle configure script will then automatically build the normal and"
	@@${ECHO_MSG} "parallel version (puzzle & ppuzzle)."
	@@${ECHO_MSG} ""
	@@${ECHO_MSG} "---------------------------------------------"

.include <bsd.port.mk>
@


1.7
log
@Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
Specifically, newer autoconf (> 2.13) has different semantic of the
configure target. In short, one should use --build=CONFIGURE_TARGET
instead of CONFIGURE_TARGET directly. Otherwise, you will get a warning
and the old semantic may be removed in later autoconf releases.

To workaround this issue, many ports hack the CONFIGURE_TARGET variable
so that it contains the ``--build='' prefix.

To solve this issue, under the fact that some ports still have
configure script generated by the old autoconf, we use runtime detection
in the do-configure target so that the proper argument can be used.

Changes to Mk/*:
 - Add runtime detection magic in bsd.port.mk
 - Remove CONFIGURE_TARGET hack in various bsd.*.mk
 - USE_GNOME=gnometarget is now an no-op

Changes to individual ports, other than removing the CONFIGURE_TARGET hack:

= pkg-plist changed (due to the ugly CONFIGURE_TARGET prefix in * executables)
  - comms/gnuradio
  - science/abinit
  - science/elmer-fem
  - science/elmer-matc
  - science/elmer-meshgen2d
  - science/elmerfront
  - science/elmerpost

= use x86_64 as ARCH
  - devel/g-wrap

= other changes
  - print/magicfilter
    GNU_CONFIGURE -> HAS_CONFIGURE since it's not generated by autoconf

Total # of ports modified:  1,027
Total # of ports affected: ~7,000 (set GNU_CONFIGURE to yes)

PR:		126524 (obsoletes 52917)
Submitted by:	rafan
Tested on:	two pointyhat 7-amd64 exp runs (by pav)
Approved by:	portmgr (pav)
@
text
@d5 1
a5 1
# $FreeBSD$
@


1.6
log
@At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.
@
text
@a17 1
CONFIGURE_TARGET=	--build=${MACHINE_ARCH}-portbld-freebsd${OSREL}
@


1.5
log
@Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.
@
text
@d18 1
a18 1
CONFIGURE_TARGET=	--build=${ARCH}-portbld-freebsd${OSREL}
@


1.4
log
@- Update to 5.2

PR:		ports/69799
Submitted by:	Jan Lentfer <Jan.Lentfer@@web.de> (maintainer)
@
text
@d18 1
a18 1
CONFIGURE_TARGET=	--build=${MACHINE_ARCH}-portbld-freebsd${OSREL}
@


1.3
log
@Use PLIST_FILES (bento-tested, marcus-reviewed).
@
text
@d9 1
a9 1
PORTVERSION=	5.1
d20 10
@


1.2
log
@De-pkg-comment.
@
text
@d19 1
@


1.1
log
@add treepuzzle 5.1
Maximum likelihood phylogeny reconstruction using quartets

PR:		45241
Submitted by:	Jan Lentfer <lentferj@@neslonek.bio.tu-darmstadt.de>
@
text
@d15 1
@

